BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011E09LP1|AL426229
(272 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1183 345 3e-95
>3x_Contig1183
Length = 3176
Score = 345 bits (171), Expect = 3e-95
Identities = 172/173 (99%)
Strand = Plus / Minus
Query: 100 aatccatcctatatatttatattattattttaatttattcagataggatagattcgaact 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1497 aatccatcctatatatttatattattattttaatttattcagataggatagattcgaact 1438
Query: 160 aactaactctttctcccaaagaaagcgcctaacccttcggcctctatctgttattatata 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1437 aactaactctttctcccaaagaaagcgcctaacccttcggcctctatctgttattatata 1378
Query: 220 agcatatttatattatttatttcaatcaaatatatattatatatttkattatt 272
|||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1377 agcatatttatattatttatttcaatcaaatatatattatatattttattatt 1325
Score = 125 bits (62), Expect = 4e-29
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 1 tattatatactaaaaawagatattattgaatattattatttatctttattcagataggat 60
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 tattatatactaattatagatattattgaatattattatttatctttattcagataggat 1535
Query: 61 agattcgaacgt 72
||||||||||||
Sbjct: 1534 agattcgaacgt 1523
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3451
Number of Sequences: 1807
Number of extensions: 3451
Number of successful extensions: 151
Number of sequences better than 1.0e-20: 1
length of query: 272
length of database: 10,358,551
effective HSP length: 15
effective length of query: 257
effective length of database: 10,331,446
effective search space: 2655181622
effective search space used: 2655181622
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.3 bits)